Cluster: CGMR005887_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR005887
- CGC Family ID: CGCFAM_00096
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_238182 | k141_238182_10 | 8250 | 9545 | + | GT4 |
| CAZyme | k141_238182 | k141_238182_11 | 9542 | 10744 | + | GT4 |
| CAZyme | k141_238182 | k141_238182_12 | 10729 | 11721 | + | GT2 |
| NULL(UNKNOWN) | k141_238182 | k141_238182_13 | 11734 | 13374 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_238182 | k141_238182_14 | 13469 | 14467 | + | 9.B.18.2.1 |
Gene ID: k141_238182_10
Type: CAZyme
Location: 8250 - 9545 (+)
Type: CAZyme
Location: 8250 - 9545 (+)
Gene ID: k141_238182_11
Type: CAZyme
Location: 9542 - 10744 (+)
Type: CAZyme
Location: 9542 - 10744 (+)
Gene ID: k141_238182_12
Type: CAZyme
Location: 10729 - 11721 (+)
Type: CAZyme
Location: 10729 - 11721 (+)
Gene ID: k141_238182_13
Type:
Location: 11734 - 13374 (+)
Type:
Location: 11734 - 13374 (+)
Gene ID: k141_238182_14
Type: TC
Location: 13469 - 14467 (+)
Type: TC
Location: 13469 - 14467 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_238182_14 | vegetarian > omnivore | 1.11311 | 0.01389 |