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Cluster: CGMR005887_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_2025 k141_2025_4 3617 4963 + 2.A.66.1.45
CAZyme k141_2025 k141_2025_5 4929 7352 - GH36
TC k141_2025 k141_2025_6 7349 8758 - 2.A.2.1.1
CAZyme k141_2025 k141_2025_7 8758 11229 - GH2
STP k141_2025 k141_2025_8 11226 11804 - TetR_N
pfam k141_2025 k141_2025_9 12032 13255 - HDOD
TC k141_2025 k141_2025_10 13334 14686 - 2.A.66.1.45
TC k141_2025 k141_2025_11 14692 16119 - 9.B.18.1.2
Gene ID: k141_2025_4
Type: TC
Location: 3617 - 4963 (+)
Gene ID: k141_2025_5
Type: CAZyme
Location: 4929 - 7352 (-)
Gene ID: k141_2025_6
Type: TC
Location: 7349 - 8758 (-)
Gene ID: k141_2025_7
Type: CAZyme
Location: 8758 - 11229 (-)
Gene ID: k141_2025_8
Type: STP
Location: 11226 - 11804 (-)
Gene ID: k141_2025_9
Type: pfam
Location: 12032 - 13255 (-)
Gene ID: k141_2025_10
Type: TC
Location: 13334 - 14686 (-)
Gene ID: k141_2025_11
Type: TC
Location: 14692 - 16119 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2025_4 vegetarian > omnivore 2.51225 0.01389
k141_2025_4 vegetarian > vegan 1.01139 0.00341

🧭 Explore Read Mapping of CGC

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