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Cluster: CGMR005786_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15562 k141_15562_3 2527 4113 + 4.A.1.1.9
TC k141_15562 k141_15562_4 4201 4671 + 4.A.3.2.5
pfam k141_15562 k141_15562_5 4684 5223 + RDD
sulfatase k141_15562 k141_15562_6 5243 6604 + S1_8
TC k141_15562 k141_15562_7 6696 7487 + 2.A.102.4.4
CAZyme k141_15562 k141_15562_8 7748 13363 + GH123
pfam k141_15562 k141_15562_9 13498 17850 + RNase_T | tRNA_anti-codon | PHP | PHP | DNA_pol3_alpha | RNase_H_2 | DNA_pol3_a_NI | HHH_6 | DNA_pol3_finger
TC k141_15562 k141_15562_10 17979 19481 + 2.A.3.7.5
pfam k141_15562 k141_15562_11 19594 20076 + DUF4358
TC k141_15562 k141_15562_12 20368 21744 + 2.A.50.2.1
Gene ID: k141_15562_3
Type: TC
Location: 2527 - 4113 (+)
Gene ID: k141_15562_4
Type: TC
Location: 4201 - 4671 (+)
Gene ID: k141_15562_5
Type: pfam
Location: 4684 - 5223 (+)
Gene ID: k141_15562_6
Type: sulfatase
Location: 5243 - 6604 (+)
Gene ID: k141_15562_7
Type: TC
Location: 6696 - 7487 (+)
Gene ID: k141_15562_8
Type: CAZyme
Location: 7748 - 13363 (+)
Gene ID: k141_15562_9
Type: pfam
Location: 13498 - 17850 (+)
Gene ID: k141_15562_10
Type: TC
Location: 17979 - 19481 (+)
Gene ID: k141_15562_11
Type: pfam
Location: 19594 - 20076 (+)
Gene ID: k141_15562_12
Type: TC
Location: 20368 - 21744 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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