Cluster: CGMR005786_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR005786
- CGC Family ID: CGCFAM_03704
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_5974 | k141_5974_8 | 6952 | 7389 | + | 4.A.6.1.9 |
| TC | k141_5974 | k141_5974_9 | 7380 | 7850 | + | 4.A.6.1.9 |
| TC | k141_5974 | k141_5974_10 | 7886 | 8671 | + | 4.A.6.1.9 |
| TC | k141_5974 | k141_5974_11 | 8668 | 9477 | + | 4.A.6.1.9 |
| CAZyme | k141_5974 | k141_5974_12 | 9527 | 11833 | + | GH95 |
| CAZyme | k141_5974 | k141_5974_13 | 11871 | 14117 | + | CBM47 | GH98 |
Gene ID: k141_5974_8
Type: TC
Location: 6952 - 7389 (+)
Type: TC
Location: 6952 - 7389 (+)
Gene ID: k141_5974_9
Type: TC
Location: 7380 - 7850 (+)
Type: TC
Location: 7380 - 7850 (+)
Gene ID: k141_5974_10
Type: TC
Location: 7886 - 8671 (+)
Type: TC
Location: 7886 - 8671 (+)
Gene ID: k141_5974_11
Type: TC
Location: 8668 - 9477 (+)
Type: TC
Location: 8668 - 9477 (+)
Gene ID: k141_5974_12
Type: CAZyme
Location: 9527 - 11833 (+)
Type: CAZyme
Location: 9527 - 11833 (+)
Gene ID: k141_5974_13
Type: CAZyme
Location: 11871 - 14117 (+)
Type: CAZyme
Location: 11871 - 14117 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium paraputrificum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.