Cluster: CGMR005786_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: host glycan/beta-glucan
- Genome ID: CGMR005786
- CGC Family ID: CGCFAM_00012
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_11889 | k141_11889_46 | 51151 | 52590 | + | GH1 |
| TC | k141_11889 | k141_11889_47 | 52634 | 52936 | + | 4.A.3.2.2 |
| TC | k141_11889 | k141_11889_48 | 52979 | 54340 | + | 4.A.3.2.9 |
| TC | k141_11889 | k141_11889_49 | 54362 | 54676 | + | 4.A.3.2.6 |
| pfam | k141_11889 | k141_11889_50 | 54745 | 55116 | + | Glyco_hydro_1 |
| CAZyme | k141_11889 | k141_11889_51 | 55091 | 56158 | + | GH1 |
Gene ID: k141_11889_46
Type: CAZyme
Location: 51151 - 52590 (+)
Type: CAZyme
Location: 51151 - 52590 (+)
Gene ID: k141_11889_47
Type: TC
Location: 52634 - 52936 (+)
Type: TC
Location: 52634 - 52936 (+)
Gene ID: k141_11889_48
Type: TC
Location: 52979 - 54340 (+)
Type: TC
Location: 52979 - 54340 (+)
Gene ID: k141_11889_49
Type: TC
Location: 54362 - 54676 (+)
Type: TC
Location: 54362 - 54676 (+)
Gene ID: k141_11889_50
Type: pfam
Location: 54745 - 55116 (+)
Type: pfam
Location: 54745 - 55116 (+)
Gene ID: k141_11889_51
Type: CAZyme
Location: 55091 - 56158 (+)
Type: CAZyme
Location: 55091 - 56158 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium paraputrificum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.