Cluster: CGMR005786_CGC32
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR005786
- CGC Family ID: CGCFAM_04136
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4178 | k141_4178_129 | 136075 | 137553 | + | GH1 |
| TF | k141_4178 | k141_4178_130 | 137639 | 138367 | + | HTH_6 |
| peptidase | k141_4178 | k141_4178_131 | 138475 | 139329 | + | S09.UPW |
| TC | k141_4178 | k141_4178_132 | 139656 | 140948 | + | 4.A.3.2.8 |
| NULL(UNKNOWN) | k141_4178 | k141_4178_133 | 141035 | 142450 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_4178 | k141_4178_134 | 142454 | 143731 | + | GH140 |
Gene ID: k141_4178_129
Type: CAZyme
Location: 136075 - 137553 (+)
Type: CAZyme
Location: 136075 - 137553 (+)
Gene ID: k141_4178_130
Type: TF
Location: 137639 - 138367 (+)
Type: TF
Location: 137639 - 138367 (+)
Gene ID: k141_4178_131
Type: peptidase
Location: 138475 - 139329 (+)
Type: peptidase
Location: 138475 - 139329 (+)
Gene ID: k141_4178_132
Type: TC
Location: 139656 - 140948 (+)
Type: TC
Location: 139656 - 140948 (+)
Gene ID: k141_4178_133
Type:
Location: 141035 - 142450 (+)
Type:
Location: 141035 - 142450 (+)
Gene ID: k141_4178_134
Type: CAZyme
Location: 142454 - 143731 (+)
Type: CAZyme
Location: 142454 - 143731 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium paraputrificum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.