Cluster: CGMR005786_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR005786
- CGC Family ID: CGCFAM_00276
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_11934 | k141_11934_336 | 354823 | 355914 | - | GH170 |
| TC | k141_11934 | k141_11934_337 | 355902 | 357161 | - | 4.A.3.2.2 |
| pfam | k141_11934 | k141_11934_338 | 357162 | 358316 | - | AnmK |
| STP | k141_11934 | k141_11934_339 | 358372 | 359271 | - | SIS |
| CAZyme | k141_11934 | k141_11934_340 | 359314 | 360348 | - | GH170 |
| TC | k141_11934 | k141_11934_341 | 360361 | 361647 | - | 4.A.3.2.2 |
Gene ID: k141_11934_336
Type: CAZyme
Location: 354823 - 355914 (-)
Type: CAZyme
Location: 354823 - 355914 (-)
Gene ID: k141_11934_337
Type: TC
Location: 355902 - 357161 (-)
Type: TC
Location: 355902 - 357161 (-)
Gene ID: k141_11934_338
Type: pfam
Location: 357162 - 358316 (-)
Type: pfam
Location: 357162 - 358316 (-)
Gene ID: k141_11934_339
Type: STP
Location: 358372 - 359271 (-)
Type: STP
Location: 358372 - 359271 (-)
Gene ID: k141_11934_340
Type: CAZyme
Location: 359314 - 360348 (-)
Type: CAZyme
Location: 359314 - 360348 (-)
Gene ID: k141_11934_341
Type: TC
Location: 360361 - 361647 (-)
Type: TC
Location: 360361 - 361647 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium paraputrificum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.