Cluster: CGMR005786_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR005786
- CGC Family ID: CGCFAM_05353
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8968 | k141_8968_3 | 2875 | 4923 | - | GH39 |
| TC | k141_8968 | k141_8968_4 | 5070 | 7673 | + | 3.A.9.1.2 |
| NULL(UNKNOWN) | k141_8968 | k141_8968_5 | 7853 | 8245 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_8968 | k141_8968_6 | 8414 | 8608 | - | SASP |
| TC | k141_8968 | k141_8968_7 | 8955 | 9551 | - | 2.A.87.2.3 |
Gene ID: k141_8968_3
Type: CAZyme
Location: 2875 - 4923 (-)
Type: CAZyme
Location: 2875 - 4923 (-)
Gene ID: k141_8968_4
Type: TC
Location: 5070 - 7673 (+)
Type: TC
Location: 5070 - 7673 (+)
Gene ID: k141_8968_5
Type:
Location: 7853 - 8245 (+)
Type:
Location: 7853 - 8245 (+)
Gene ID: k141_8968_6
Type: pfam
Location: 8414 - 8608 (-)
Type: pfam
Location: 8414 - 8608 (-)
Gene ID: k141_8968_7
Type: TC
Location: 8955 - 9551 (-)
Type: TC
Location: 8955 - 9551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium paraputrificum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.