Cluster: CGMR005786_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR005786
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4026 | k141_4026_61 | 63933 | 65186 | + | 2.A.1.21.5 |
| TF | k141_4026 | k141_4026_62 | 65249 | 66349 | + | HTH_5 |
| NULL(UNKNOWN) | k141_4026 | k141_4026_63 | 66526 | 67071 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_4026 | k141_4026_64 | 67622 | 70375 | - | GH18 |
| pfam | k141_4026 | k141_4026_65 | 70554 | 71081 | - | 2_5_RNA_ligase2 |
| NULL(UNKNOWN) | k141_4026 | k141_4026_66 | 71081 | 71398 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_4026 | k141_4026_67 | 71454 | 72650 | - | 2.A.27.1.1 |
| TC | k141_4026 | k141_4026_68 | 72722 | 74347 | - | 3.A.1.121.2 |
Gene ID: k141_4026_61
Type: TC
Location: 63933 - 65186 (+)
Type: TC
Location: 63933 - 65186 (+)
Gene ID: k141_4026_62
Type: TF
Location: 65249 - 66349 (+)
Type: TF
Location: 65249 - 66349 (+)
Gene ID: k141_4026_63
Type:
Location: 66526 - 67071 (-)
Type:
Location: 66526 - 67071 (-)
Gene ID: k141_4026_64
Type: CAZyme
Location: 67622 - 70375 (-)
Type: CAZyme
Location: 67622 - 70375 (-)
Gene ID: k141_4026_65
Type: pfam
Location: 70554 - 71081 (-)
Type: pfam
Location: 70554 - 71081 (-)
Gene ID: k141_4026_66
Type:
Location: 71081 - 71398 (-)
Type:
Location: 71081 - 71398 (-)
Gene ID: k141_4026_67
Type: TC
Location: 71454 - 72650 (-)
Type: TC
Location: 71454 - 72650 (-)
Gene ID: k141_4026_68
Type: TC
Location: 72722 - 74347 (-)
Type: TC
Location: 72722 - 74347 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium paraputrificum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.