Cluster: CGMR005601_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR005601
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_320445 | k141_320445_4 | 5653 | 6921 | + | 2.A.55.2.6 |
| TC | k141_320445 | k141_320445_5 | 7195 | 7863 | + | 9.B.20.1.4 |
| TC | k141_320445 | k141_320445_6 | 7933 | 9810 | - | 4.A.2.1.4 |
| STP | k141_320445 | k141_320445_7 | 9864 | 10769 | - | PfkB |
| TF | k141_320445 | k141_320445_8 | 10766 | 11533 | - | HTH_DeoR |
| TC | k141_320445 | k141_320445_9 | 11714 | 12628 | + | 2.A.115.1.1 |
| TC | k141_320445 | k141_320445_10 | 12699 | 13316 | - | 2.A.76.1.7 |
| CAZyme | k141_320445 | k141_320445_11 | 13334 | 15073 | - | GT41 |
| pfam | k141_320445 | k141_320445_12 | 15256 | 15672 | + | DUF4234 | DUF4234 |
| pfam | k141_320445 | k141_320445_13 | 15700 | 16065 | + | DUF2752 |
| TC | k141_320445 | k141_320445_14 | 16396 | 18117 | + | 1.B.52.2.2 |
| pfam | k141_320445 | k141_320445_15 | 18742 | 19899 | - | GDPD |
| TC | k141_320445 | k141_320445_16 | 20099 | 21526 | + | 2.A.1.4.6 |
Gene ID: k141_320445_4
Type: TC
Location: 5653 - 6921 (+)
Type: TC
Location: 5653 - 6921 (+)
Gene ID: k141_320445_5
Type: TC
Location: 7195 - 7863 (+)
Type: TC
Location: 7195 - 7863 (+)
Gene ID: k141_320445_6
Type: TC
Location: 7933 - 9810 (-)
Type: TC
Location: 7933 - 9810 (-)
Gene ID: k141_320445_7
Type: STP
Location: 9864 - 10769 (-)
Type: STP
Location: 9864 - 10769 (-)
Gene ID: k141_320445_8
Type: TF
Location: 10766 - 11533 (-)
Type: TF
Location: 10766 - 11533 (-)
Gene ID: k141_320445_9
Type: TC
Location: 11714 - 12628 (+)
Type: TC
Location: 11714 - 12628 (+)
Gene ID: k141_320445_10
Type: TC
Location: 12699 - 13316 (-)
Type: TC
Location: 12699 - 13316 (-)
Gene ID: k141_320445_11
Type: CAZyme
Location: 13334 - 15073 (-)
Type: CAZyme
Location: 13334 - 15073 (-)
Gene ID: k141_320445_12
Type: pfam
Location: 15256 - 15672 (+)
Type: pfam
Location: 15256 - 15672 (+)
Gene ID: k141_320445_13
Type: pfam
Location: 15700 - 16065 (+)
Type: pfam
Location: 15700 - 16065 (+)
Gene ID: k141_320445_14
Type: TC
Location: 16396 - 18117 (+)
Type: TC
Location: 16396 - 18117 (+)
Gene ID: k141_320445_15
Type: pfam
Location: 18742 - 19899 (-)
Type: pfam
Location: 18742 - 19899 (-)
Gene ID: k141_320445_16
Type: TC
Location: 20099 - 21526 (+)
Type: TC
Location: 20099 - 21526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.