Cluster: CGMR005601_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR005601
- CGC Family ID: CGCFAM_01182
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_110515 | k141_110515_54 | 57253 | 58836 | + | 3.A.6.2.1 |
| pfam | k141_110515 | k141_110515_55 | 58886 | 59878 | + | FliG_C | FliG_M | FliG_N | FliG_N |
| pfam | k141_110515 | k141_110515_56 | 59871 | 60659 | + | FliH | T3SS_SCTL |
| TC | k141_110515 | k141_110515_57 | 60659 | 61966 | + | 3.A.6.3.1 |
| pfam | k141_110515 | k141_110515_58 | 61989 | 62453 | + | FliJ |
| CAZyme | k141_110515 | k141_110515_59 | 62453 | 63007 | + | GH23 |
Gene ID: k141_110515_54
Type: TC
Location: 57253 - 58836 (+)
Type: TC
Location: 57253 - 58836 (+)
Gene ID: k141_110515_55
Type: pfam
Location: 58886 - 59878 (+)
Type: pfam
Location: 58886 - 59878 (+)
Gene ID: k141_110515_56
Type: pfam
Location: 59871 - 60659 (+)
Type: pfam
Location: 59871 - 60659 (+)
Gene ID: k141_110515_57
Type: TC
Location: 60659 - 61966 (+)
Type: TC
Location: 60659 - 61966 (+)
Gene ID: k141_110515_58
Type: pfam
Location: 61989 - 62453 (+)
Type: pfam
Location: 61989 - 62453 (+)
Gene ID: k141_110515_59
Type: CAZyme
Location: 62453 - 63007 (+)
Type: CAZyme
Location: 62453 - 63007 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.