Cluster: CGMR005601_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR005601
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_107894 | k141_107894_3 | 2446 | 3879 | - | GT83 |
| CAZyme | k141_107894 | k141_107894_4 | 3907 | 4926 | - | GT2 |
| sulfatase | k141_107894 | k141_107894_5 | 5046 | 6965 | - | S1_8 |
| TC | k141_107894 | k141_107894_6 | 7162 | 8400 | - | 2.A.23.4.1 |
| TC | k141_107894 | k141_107894_7 | 8752 | 10848 | - | 1.B.52.2.1 |
| STP | k141_107894 | k141_107894_8 | 10968 | 12269 | - | GGDEF | HD |
| TC | k141_107894 | k141_107894_9 | 12430 | 14340 | - | 9.B.34.1.3 |
| TC | k141_107894 | k141_107894_10 | 14388 | 15158 | - | 8.A.59.4.1 |
| STP | k141_107894 | k141_107894_11 | 15155 | 15469 | - | Response_reg |
| STP | k141_107894 | k141_107894_12 | 15462 | 18866 | - | GAF | HATPase_c | HisKA | Response_reg | Response_reg |
| TC | k141_107894 | k141_107894_13 | 19031 | 20731 | - | 2.A.53.3.11 |
| TC | k141_107894 | k141_107894_14 | 21002 | 22006 | - | 1.B.52.2.1 |
Gene ID: k141_107894_3
Type: CAZyme
Location: 2446 - 3879 (-)
Type: CAZyme
Location: 2446 - 3879 (-)
Gene ID: k141_107894_4
Type: CAZyme
Location: 3907 - 4926 (-)
Type: CAZyme
Location: 3907 - 4926 (-)
Gene ID: k141_107894_5
Type: sulfatase
Location: 5046 - 6965 (-)
Type: sulfatase
Location: 5046 - 6965 (-)
Gene ID: k141_107894_6
Type: TC
Location: 7162 - 8400 (-)
Type: TC
Location: 7162 - 8400 (-)
Gene ID: k141_107894_7
Type: TC
Location: 8752 - 10848 (-)
Type: TC
Location: 8752 - 10848 (-)
Gene ID: k141_107894_8
Type: STP
Location: 10968 - 12269 (-)
Type: STP
Location: 10968 - 12269 (-)
Gene ID: k141_107894_9
Type: TC
Location: 12430 - 14340 (-)
Type: TC
Location: 12430 - 14340 (-)
Gene ID: k141_107894_10
Type: TC
Location: 14388 - 15158 (-)
Type: TC
Location: 14388 - 15158 (-)
Gene ID: k141_107894_11
Type: STP
Location: 15155 - 15469 (-)
Type: STP
Location: 15155 - 15469 (-)
Gene ID: k141_107894_12
Type: STP
Location: 15462 - 18866 (-)
Type: STP
Location: 15462 - 18866 (-)
Gene ID: k141_107894_13
Type: TC
Location: 19031 - 20731 (-)
Type: TC
Location: 19031 - 20731 (-)
Gene ID: k141_107894_14
Type: TC
Location: 21002 - 22006 (-)
Type: TC
Location: 21002 - 22006 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.