Cluster: CGMR005601_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR005601
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_290172 | k141_290172_12 | 11888 | 13195 | + | 2.A.40.7.2 |
| CAZyme | k141_290172 | k141_290172_13 | 13220 | 13969 | + | GH73 |
| TC | k141_290172 | k141_290172_14 | 14137 | 15756 | + | 3.A.1.121.4 |
| pfam | k141_290172 | k141_290172_15 | 15861 | 17471 | + | RIO1 | ABC1 |
| pfam | k141_290172 | k141_290172_16 | 17485 | 17847 | + | CM_1 |
| TC | k141_290172 | k141_290172_17 | 17870 | 19210 | + | 2.A.40.3.1 |
Gene ID: k141_290172_12
Type: TC
Location: 11888 - 13195 (+)
Type: TC
Location: 11888 - 13195 (+)
Gene ID: k141_290172_13
Type: CAZyme
Location: 13220 - 13969 (+)
Type: CAZyme
Location: 13220 - 13969 (+)
Gene ID: k141_290172_14
Type: TC
Location: 14137 - 15756 (+)
Type: TC
Location: 14137 - 15756 (+)
Gene ID: k141_290172_15
Type: pfam
Location: 15861 - 17471 (+)
Type: pfam
Location: 15861 - 17471 (+)
Gene ID: k141_290172_16
Type: pfam
Location: 17485 - 17847 (+)
Type: pfam
Location: 17485 - 17847 (+)
Gene ID: k141_290172_17
Type: TC
Location: 17870 - 19210 (+)
Type: TC
Location: 17870 - 19210 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.