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Cluster: CGMR005514_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_284167 k141_284167_17 17161 18531 + 2.A.66.1.32
pfam k141_284167 k141_284167_18 18581 19291 + Acyl-ACP_TE | Acyl-ACP_TE_C
TF k141_284167 k141_284167_19 19329 20333 - LacI
TC k141_284167 k141_284167_20 20750 22252 + 3.A.1.2.3
TC k141_284167 k141_284167_21 22249 23229 + 3.A.1.2.15
STP k141_284167 k141_284167_22 23324 24310 + Peripla_BP_3
CAZyme k141_284167 k141_284167_23 24470 27160 + GH78
CAZyme k141_284167 k141_284167_24 27222 30080 + CBM67 | GH78
Gene ID: k141_284167_17
Type: TC
Location: 17161 - 18531 (+)
Gene ID: k141_284167_18
Type: pfam
Location: 18581 - 19291 (+)
Gene ID: k141_284167_19
Type: TF
Location: 19329 - 20333 (-)
Gene ID: k141_284167_20
Type: TC
Location: 20750 - 22252 (+)
Gene ID: k141_284167_21
Type: TC
Location: 22249 - 23229 (+)
Gene ID: k141_284167_22
Type: STP
Location: 23324 - 24310 (+)
Gene ID: k141_284167_23
Type: CAZyme
Location: 24470 - 27160 (+)
Gene ID: k141_284167_24
Type: CAZyme
Location: 27222 - 30080 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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