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Cluster: CGMR005514_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_173492 k141_173492_3 2990 5434 - GT2 | GT2
CAZyme k141_173492 k141_173492_4 5436 7958 - GT2
pfam k141_173492 k141_173492_5 7963 10197 - Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
TC k141_173492 k141_173492_6 10194 11474 - 3.A.1.103.6
TC k141_173492 k141_173492_7 11492 12307 - 3.A.1.104.1
pfam k141_173492 k141_173492_8 12318 12872 - dTDP_sugar_isom
STP k141_173492 k141_173492_9 12938 14068 - Aminotran_1_2
CAZyme k141_173492 k141_173492_10 14068 15078 - GT2
TC k141_173492 k141_173492_11 15090 15434 - 2.A.7.33.5
Gene ID: k141_173492_3
Type: CAZyme
Location: 2990 - 5434 (-)
Gene ID: k141_173492_4
Type: CAZyme
Location: 5436 - 7958 (-)
Gene ID: k141_173492_5
Type: pfam
Location: 7963 - 10197 (-)
Gene ID: k141_173492_6
Type: TC
Location: 10194 - 11474 (-)
Gene ID: k141_173492_7
Type: TC
Location: 11492 - 12307 (-)
Gene ID: k141_173492_8
Type: pfam
Location: 12318 - 12872 (-)
Gene ID: k141_173492_9
Type: STP
Location: 12938 - 14068 (-)
Gene ID: k141_173492_10
Type: CAZyme
Location: 14068 - 15078 (-)
Gene ID: k141_173492_11
Type: TC
Location: 15090 - 15434 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_173492_6 vegetarian > vegan 1.04757 0.01901
k141_173492_9 vegetarian > vegan 1.34113 0.01557

🧭 Explore Read Mapping of CGC

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