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Cluster: CGMR005514_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_82489 k141_82489_5 3632 5488 + 3.A.16.1.1
CAZyme k141_82489 k141_82489_6 5727 7853 + CBM34 | GH13_39
pfam k141_82489 k141_82489_7 7983 8846 + F_bP_aldolase
pfam k141_82489 k141_82489_8 8924 10132 + Acetyltransf_1 | Acetyltransf_9 | SCP2_2 | Acetyltransf_17
TC k141_82489 k141_82489_9 10378 11652 + 3.A.1.1.45
TC k141_82489 k141_82489_10 11828 12682 + 3.A.1.1.45
TC k141_82489 k141_82489_11 12682 13542 + 3.A.1.1.45
TF k141_82489 k141_82489_12 13749 15299 + HTH_AraC | HTH_AraC
TC k141_82489 k141_82489_13 15262 16977 + 9.B.33.1.1
TC k141_82489 k141_82489_14 16967 18658 + 3.A.1.1.9
TC k141_82489 k141_82489_15 18822 20228 + 2.A.66.1.28
TC k141_82489 k141_82489_16 20554 21465 + 2.A.4.7.2
pfam k141_82489 k141_82489_17 21573 23429 - PQQ_2 | PQQ_2 | Beta-prop_ACSF4
TC k141_82489 k141_82489_18 23842 25251 + 2.A.25.1.4
pfam k141_82489 k141_82489_19 25448 26326 + DegV
CAZyme k141_82489 k141_82489_20 26327 27157 - CE4
Gene ID: k141_82489_5
Type: TC
Location: 3632 - 5488 (+)
Gene ID: k141_82489_6
Type: CAZyme
Location: 5727 - 7853 (+)
Gene ID: k141_82489_7
Type: pfam
Location: 7983 - 8846 (+)
Gene ID: k141_82489_8
Type: pfam
Location: 8924 - 10132 (+)
Gene ID: k141_82489_9
Type: TC
Location: 10378 - 11652 (+)
Gene ID: k141_82489_10
Type: TC
Location: 11828 - 12682 (+)
Gene ID: k141_82489_11
Type: TC
Location: 12682 - 13542 (+)
Gene ID: k141_82489_12
Type: TF
Location: 13749 - 15299 (+)
Gene ID: k141_82489_13
Type: TC
Location: 15262 - 16977 (+)
Gene ID: k141_82489_14
Type: TC
Location: 16967 - 18658 (+)
Gene ID: k141_82489_15
Type: TC
Location: 18822 - 20228 (+)
Gene ID: k141_82489_16
Type: TC
Location: 20554 - 21465 (+)
Gene ID: k141_82489_17
Type: pfam
Location: 21573 - 23429 (-)
Gene ID: k141_82489_18
Type: TC
Location: 23842 - 25251 (+)
Gene ID: k141_82489_19
Type: pfam
Location: 25448 - 26326 (+)
Gene ID: k141_82489_20
Type: CAZyme
Location: 26327 - 27157 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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