dbCAN HGM

Cluster: CGMR005514_CGC11

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	k141_216972	k141_216972_3	2172	3539	+	2.A.66.1.32
CAZyme	k141_216972	k141_216972_4	3607	6042	-	GH94
TF	k141_216972	k141_216972_5	6490	7500	+	LacI
NULL(UNKNOWN)	k141_216972	k141_216972_6	7583	8935	+	NULL(UNKNOWN) [View Structural Homologs]
TC	k141_216972	k141_216972_7	9021	10001	+	3.A.1.1.4
TC	k141_216972	k141_216972_8	9998	10855	+	3.A.1.1.11
TC	k141_216972	k141_216972_9	10961	11605	+	1.A.62.2.1
TC	k141_216972	k141_216972_10	11732	13462	-	1.A.11.2.7

Gene ID: k141_216972_3
Type: TC
Location: 2172 - 3539 (+)

Gene ID: k141_216972_4
Type: CAZyme
Location: 3607 - 6042 (-)

Gene ID: k141_216972_5
Type: TF
Location: 6490 - 7500 (+)

Gene ID: k141_216972_6
Type:
Location: 7583 - 8935 (+)

Gene ID: k141_216972_7
Type: TC
Location: 9021 - 10001 (+)

Gene ID: k141_216972_8
Type: TC
Location: 9998 - 10855 (+)

Gene ID: k141_216972_9
Type: TC
Location: 10961 - 11605 (+)

Gene ID: k141_216972_10
Type: TC
Location: 11732 - 13462 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Species

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
k141_216972_6	vegan > omnivore	1.50825	0.03506
k141_216972_7	vegan > omnivore	1.36431	0.03506
k141_216972_8	vegan > omnivore	1.44868	0.03506
k141_216972_9	vegan > omnivore	1.44563	0.03506

Gene ID	Condition Pair	log2FC	FDR P-value
k141_216972_7	vegan > omnivore	1.38838	0.00863