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Cluster: CGMR005139_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_198008 k141_198008_4 1102 1335 + 3.D.1.6.3
pfam k141_198008 k141_198008_5 1398 2135 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
TC k141_198008 k141_198008_6 2205 4001 + 8.A.59.2.1
TF k141_198008 k141_198008_7 3994 4809 + HTH_AraC | HTH_AraC
STP k141_198008 k141_198008_8 4739 5803 - SBP_bac_1
TC k141_198008 k141_198008_9 5784 6668 - 3.A.1.1.34
TC k141_198008 k141_198008_10 6686 7594 - 3.A.1.1.20
STP k141_198008 k141_198008_11 7657 8952 - SBP_bac_1
pfam k141_198008 k141_198008_12 9183 9677 - AAA_33
CAZyme k141_198008 k141_198008_13 9811 11169 + GH1
Gene ID: k141_198008_4
Type: TC
Location: 1102 - 1335 (+)
Gene ID: k141_198008_5
Type: pfam
Location: 1398 - 2135 (+)
Gene ID: k141_198008_6
Type: TC
Location: 2205 - 4001 (+)
Gene ID: k141_198008_7
Type: TF
Location: 3994 - 4809 (+)
Gene ID: k141_198008_8
Type: STP
Location: 4739 - 5803 (-)
Gene ID: k141_198008_9
Type: TC
Location: 5784 - 6668 (-)
Gene ID: k141_198008_10
Type: TC
Location: 6686 - 7594 (-)
Gene ID: k141_198008_11
Type: STP
Location: 7657 - 8952 (-)
Gene ID: k141_198008_12
Type: pfam
Location: 9183 - 9677 (-)
Gene ID: k141_198008_13
Type: CAZyme
Location: 9811 - 11169 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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