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Cluster: CGMR004813_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_332031 k141_332031_29 30202 32094 - 3.A.1.135.5
TC k141_332031 k141_332031_30 32094 33839 - 3.A.1.135.5
TF k141_332031 k141_332031_31 33918 34358 - MarR
NULL(UNKNOWN) k141_332031 k141_332031_32 34533 35309 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_332031 k141_332031_33 35364 36785 - GT5
pfam k141_332031 k141_332031_34 36861 37976 - NTP_transferase | Hexapep_GlmU
pfam k141_332031 k141_332031_35 37969 39210 - NTP_transferase | Hexapep_GlmU
CAZyme k141_332031 k141_332031_36 39229 41208 - CBM48 | GH13_9
Gene ID: k141_332031_29
Type: TC
Location: 30202 - 32094 (-)
Gene ID: k141_332031_30
Type: TC
Location: 32094 - 33839 (-)
Gene ID: k141_332031_31
Type: TF
Location: 33918 - 34358 (-)
Gene ID: k141_332031_32
Type:
Location: 34533 - 35309 (-)
Gene ID: k141_332031_33
Type: CAZyme
Location: 35364 - 36785 (-)
Gene ID: k141_332031_34
Type: pfam
Location: 36861 - 37976 (-)
Gene ID: k141_332031_35
Type: pfam
Location: 37969 - 39210 (-)
Gene ID: k141_332031_36
Type: CAZyme
Location: 39229 - 41208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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