Cluster: CGMR004813_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR004813
- CGC Family ID: CGCFAM_00126
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_152276 | k141_152276_19 | 17231 | 18613 | - | 9.B.18.1.3 |
| CAZyme | k141_152276 | k141_152276_20 | 18821 | 19855 | - | GT2 |
| pfam | k141_152276 | k141_152276_21 | 19859 | 20965 | - | FAD_binding_2 | Amino_oxidase | GLF | FAD_oxidored | NAD_binding_8 |
| CAZyme | k141_152276 | k141_152276_22 | 20962 | 21792 | - | GT2 |
| TC | k141_152276 | k141_152276_23 | 21820 | 22563 | - | 3.A.1.103.1 |
Gene ID: k141_152276_19
Type: TC
Location: 17231 - 18613 (-)
Type: TC
Location: 17231 - 18613 (-)
Gene ID: k141_152276_20
Type: CAZyme
Location: 18821 - 19855 (-)
Type: CAZyme
Location: 18821 - 19855 (-)
Gene ID: k141_152276_21
Type: pfam
Location: 19859 - 20965 (-)
Type: pfam
Location: 19859 - 20965 (-)
Gene ID: k141_152276_22
Type: CAZyme
Location: 20962 - 21792 (-)
Type: CAZyme
Location: 20962 - 21792 (-)
Gene ID: k141_152276_23
Type: TC
Location: 21820 - 22563 (-)
Type: TC
Location: 21820 - 22563 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Angelakisella
Species
Angelakisella sp023451415
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_152276_23 | vegan > omnivore | 1.40269 | 0.03201 |