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Cluster: CGMR004813_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_237709 k141_237709_30 24722 26302 - 3.A.1.5.38
TC k141_237709 k141_237709_31 26322 27332 - 3.A.1.5.15
TC k141_237709 k141_237709_32 27329 28336 - 3.A.1.5.2
TC k141_237709 k141_237709_33 28357 29232 - 3.A.1.5.20
TC k141_237709 k141_237709_34 29263 30186 - 3.A.1.5.20
TC k141_237709 k141_237709_35 30624 32360 + 8.A.59.2.1
TF k141_237709 k141_237709_36 32357 33934 + HTH_AraC
peptidase k141_237709 k141_237709_37 34307 35788 + M38.UNW
TC k141_237709 k141_237709_38 35823 37181 + 2.A.35.2.1
peptidase k141_237709 k141_237709_39 37207 38697 + M38.UNW
CAZyme k141_237709 k141_237709_40 38815 39588 - GH25
pfam k141_237709 k141_237709_41 39731 40036 + Trns_repr_metal
TC k141_237709 k141_237709_42 40059 42569 + 3.A.3.5.15
Gene ID: k141_237709_30
Type: TC
Location: 24722 - 26302 (-)
Gene ID: k141_237709_31
Type: TC
Location: 26322 - 27332 (-)
Gene ID: k141_237709_32
Type: TC
Location: 27329 - 28336 (-)
Gene ID: k141_237709_33
Type: TC
Location: 28357 - 29232 (-)
Gene ID: k141_237709_34
Type: TC
Location: 29263 - 30186 (-)
Gene ID: k141_237709_35
Type: TC
Location: 30624 - 32360 (+)
Gene ID: k141_237709_36
Type: TF
Location: 32357 - 33934 (+)
Gene ID: k141_237709_37
Type: peptidase
Location: 34307 - 35788 (+)
Gene ID: k141_237709_38
Type: TC
Location: 35823 - 37181 (+)
Gene ID: k141_237709_39
Type: peptidase
Location: 37207 - 38697 (+)
Gene ID: k141_237709_40
Type: CAZyme
Location: 38815 - 39588 (-)
Gene ID: k141_237709_41
Type: pfam
Location: 39731 - 40036 (+)
Gene ID: k141_237709_42
Type: TC
Location: 40059 - 42569 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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