Cluster: CGMR004729_CGC11
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR004729
- CGC Family ID: CGCFAM_00589
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_76770 | k141_76770_7 | 3829 | 6054 | - | 9.B.174.1.2 |
| pfam | k141_76770 | k141_76770_8 | 6234 | 7010 | + | SurE |
| NULL(UNKNOWN) | k141_76770 | k141_76770_9 | 7003 | 7287 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_76770 | k141_76770_10 | 7344 | 8471 | + | GT19 |
| peptidase | k141_76770 | k141_76770_11 | 8642 | 9193 | + | C40.UPW |
| peptidase | k141_76770 | k141_76770_12 | 9269 | 9790 | + | C40.UPW |
| TC | k141_76770 | k141_76770_13 | 9816 | 11858 | + | 3.A.11.1.1 |
Gene ID: k141_76770_7
Type: TC
Location: 3829 - 6054 (-)
Type: TC
Location: 3829 - 6054 (-)
Gene ID: k141_76770_8
Type: pfam
Location: 6234 - 7010 (+)
Type: pfam
Location: 6234 - 7010 (+)
Gene ID: k141_76770_9
Type:
Location: 7003 - 7287 (+)
Type:
Location: 7003 - 7287 (+)
Gene ID: k141_76770_10
Type: CAZyme
Location: 7344 - 8471 (+)
Type: CAZyme
Location: 7344 - 8471 (+)
Gene ID: k141_76770_11
Type: peptidase
Location: 8642 - 9193 (+)
Type: peptidase
Location: 8642 - 9193 (+)
Gene ID: k141_76770_12
Type: peptidase
Location: 9269 - 9790 (+)
Type: peptidase
Location: 9269 - 9790 (+)
Gene ID: k141_76770_13
Type: TC
Location: 9816 - 11858 (+)
Type: TC
Location: 9816 - 11858 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Gelidibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.