Cluster: CGMR003789_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR003789
- CGC Family ID: CGCFAM_02172
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_5793 | k141_5793_46 | 49641 | 50867 | + | GH13 |
| TC | k141_5793 | k141_5793_47 | 51050 | 52339 | + | 3.A.1.1.22 |
| TC | k141_5793 | k141_5793_48 | 52538 | 54121 | + | 3.A.1.1.1 |
| TC | k141_5793 | k141_5793_49 | 54143 | 55099 | + | 3.A.1.1.22 |
| CAZyme | k141_5793 | k141_5793_50 | 55247 | 57247 | + | GH13_21 |
Gene ID: k141_5793_46
Type: CAZyme
Location: 49641 - 50867 (+)
Type: CAZyme
Location: 49641 - 50867 (+)
Gene ID: k141_5793_47
Type: TC
Location: 51050 - 52339 (+)
Type: TC
Location: 51050 - 52339 (+)
Gene ID: k141_5793_48
Type: TC
Location: 52538 - 54121 (+)
Type: TC
Location: 52538 - 54121 (+)
Gene ID: k141_5793_49
Type: TC
Location: 54143 - 55099 (+)
Type: TC
Location: 54143 - 55099 (+)
Gene ID: k141_5793_50
Type: CAZyme
Location: 55247 - 57247 (+)
Type: CAZyme
Location: 55247 - 57247 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinomyces
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.