Cluster: CGMR003789_CGC29
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR003789
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_30756 | k141_30756_8 | 8423 | 9622 | - | GH91 |
| NULL(UNKNOWN) | k141_30756 | k141_30756_9 | 9673 | 9888 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_30756 | k141_30756_10 | 9945 | 11000 | - | LacI |
| CAZyme | k141_30756 | k141_30756_11 | 11071 | 12417 | - | GH91 |
| TC | k141_30756 | k141_30756_12 | 12450 | 13289 | - | 3.A.1.1.41 |
| TC | k141_30756 | k141_30756_13 | 13289 | 14170 | - | 3.A.1.1.17 |
| TC | k141_30756 | k141_30756_14 | 14241 | 15545 | - | 3.A.1.1.41 |
| CAZyme | k141_30756 | k141_30756_15 | 15773 | 16999 | + | GH32 |
| pfam | k141_30756 | k141_30756_16 | 17390 | 18247 | - | SGL |
| CAZyme | k141_30756 | k141_30756_17 | 18474 | 21365 | - | GH13_13 |
| CAZyme | k141_30756 | k141_30756_18 | 21704 | 25630 | - | GH13_13 |
| CAZyme | k141_30756 | k141_30756_19 | 25698 | 28874 | - | GH13_13 |
| STP | k141_30756 | k141_30756_20 | 29034 | 29762 | - | TetR_N |
| TC | k141_30756 | k141_30756_21 | 30064 | 31848 | - | 3.A.1.119.1 |
| TC | k141_30756 | k141_30756_22 | 31845 | 33986 | - | 3.A.1.119.1 |
Gene ID: k141_30756_8
Type: CAZyme
Location: 8423 - 9622 (-)
Type: CAZyme
Location: 8423 - 9622 (-)
Gene ID: k141_30756_9
Type:
Location: 9673 - 9888 (-)
Type:
Location: 9673 - 9888 (-)
Gene ID: k141_30756_10
Type: TF
Location: 9945 - 11000 (-)
Type: TF
Location: 9945 - 11000 (-)
Gene ID: k141_30756_11
Type: CAZyme
Location: 11071 - 12417 (-)
Type: CAZyme
Location: 11071 - 12417 (-)
Gene ID: k141_30756_12
Type: TC
Location: 12450 - 13289 (-)
Type: TC
Location: 12450 - 13289 (-)
Gene ID: k141_30756_13
Type: TC
Location: 13289 - 14170 (-)
Type: TC
Location: 13289 - 14170 (-)
Gene ID: k141_30756_14
Type: TC
Location: 14241 - 15545 (-)
Type: TC
Location: 14241 - 15545 (-)
Gene ID: k141_30756_15
Type: CAZyme
Location: 15773 - 16999 (+)
Type: CAZyme
Location: 15773 - 16999 (+)
Gene ID: k141_30756_16
Type: pfam
Location: 17390 - 18247 (-)
Type: pfam
Location: 17390 - 18247 (-)
Gene ID: k141_30756_17
Type: CAZyme
Location: 18474 - 21365 (-)
Type: CAZyme
Location: 18474 - 21365 (-)
Gene ID: k141_30756_18
Type: CAZyme
Location: 21704 - 25630 (-)
Type: CAZyme
Location: 21704 - 25630 (-)
Gene ID: k141_30756_19
Type: CAZyme
Location: 25698 - 28874 (-)
Type: CAZyme
Location: 25698 - 28874 (-)
Gene ID: k141_30756_20
Type: STP
Location: 29034 - 29762 (-)
Type: STP
Location: 29034 - 29762 (-)
Gene ID: k141_30756_21
Type: TC
Location: 30064 - 31848 (-)
Type: TC
Location: 30064 - 31848 (-)
Gene ID: k141_30756_22
Type: TC
Location: 31845 - 33986 (-)
Type: TC
Location: 31845 - 33986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinomyces
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.