Cluster: CGMR003789_CGC26
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR003789
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_17662 | k141_17662_31 | 37831 | 39714 | - | GH13_31 |
| sulfatase | k141_17662 | k141_17662_32 | 39935 | 41329 | + | S1_6 |
| TC | k141_17662 | k141_17662_33 | 41460 | 42398 | - | 3.A.1.1.28 |
| TC | k141_17662 | k141_17662_34 | 42405 | 43325 | - | 3.A.1.1.28 |
| TC | k141_17662 | k141_17662_35 | 43343 | 44614 | - | 3.A.1.1.44 |
| TF | k141_17662 | k141_17662_36 | 44749 | 45879 | + | 0040517 |
| CAZyme | k141_17662 | k141_17662_37 | 45911 | 48433 | + | GH31_15 |
| pfam | k141_17662 | k141_17662_38 | 48445 | 49269 | + | adh_short | adh_short_C2 |
| TF | k141_17662 | k141_17662_39 | 49297 | 50313 | - | LacI |
| CAZyme | k141_17662 | k141_17662_40 | 50347 | 52089 | - | GH13_30 |
| TC | k141_17662 | k141_17662_41 | 52243 | 53109 | - | 3.A.1.1.41 |
| TC | k141_17662 | k141_17662_42 | 53106 | 54173 | - | 3.A.1.1.25 |
| TC | k141_17662 | k141_17662_43 | 54281 | 55588 | - | 3.A.1.1.41 |
| CAZyme | k141_17662 | k141_17662_44 | 55869 | 58349 | + | GH3 |
| TC | k141_17662 | k141_17662_45 | 58375 | 60009 | + | 2.A.1.3.32 |
Gene ID: k141_17662_31
Type: CAZyme
Location: 37831 - 39714 (-)
Type: CAZyme
Location: 37831 - 39714 (-)
Gene ID: k141_17662_32
Type: sulfatase
Location: 39935 - 41329 (+)
Type: sulfatase
Location: 39935 - 41329 (+)
Gene ID: k141_17662_33
Type: TC
Location: 41460 - 42398 (-)
Type: TC
Location: 41460 - 42398 (-)
Gene ID: k141_17662_34
Type: TC
Location: 42405 - 43325 (-)
Type: TC
Location: 42405 - 43325 (-)
Gene ID: k141_17662_35
Type: TC
Location: 43343 - 44614 (-)
Type: TC
Location: 43343 - 44614 (-)
Gene ID: k141_17662_36
Type: TF
Location: 44749 - 45879 (+)
Type: TF
Location: 44749 - 45879 (+)
Gene ID: k141_17662_37
Type: CAZyme
Location: 45911 - 48433 (+)
Type: CAZyme
Location: 45911 - 48433 (+)
Gene ID: k141_17662_38
Type: pfam
Location: 48445 - 49269 (+)
Type: pfam
Location: 48445 - 49269 (+)
Gene ID: k141_17662_39
Type: TF
Location: 49297 - 50313 (-)
Type: TF
Location: 49297 - 50313 (-)
Gene ID: k141_17662_40
Type: CAZyme
Location: 50347 - 52089 (-)
Type: CAZyme
Location: 50347 - 52089 (-)
Gene ID: k141_17662_41
Type: TC
Location: 52243 - 53109 (-)
Type: TC
Location: 52243 - 53109 (-)
Gene ID: k141_17662_42
Type: TC
Location: 53106 - 54173 (-)
Type: TC
Location: 53106 - 54173 (-)
Gene ID: k141_17662_43
Type: TC
Location: 54281 - 55588 (-)
Type: TC
Location: 54281 - 55588 (-)
Gene ID: k141_17662_44
Type: CAZyme
Location: 55869 - 58349 (+)
Type: CAZyme
Location: 55869 - 58349 (+)
Gene ID: k141_17662_45
Type: TC
Location: 58375 - 60009 (+)
Type: TC
Location: 58375 - 60009 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Actinomyces
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.