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Cluster: CGMR003789_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_271 k141_271_27 32414 33817 - 4.A.1.1.5
TF k141_271 k141_271_28 34049 34822 + GntR
TC k141_271 k141_271_29 34982 35212 + 4.A.1.1.5
TC k141_271 k141_271_30 35209 35664 + 4.A.3.2.5
CAZyme k141_271 k141_271_31 35798 37966 - GH77
TC k141_271 k141_271_32 38334 38564 - 4.A.1.1.5
TC k141_271 k141_271_33 38937 40634 + 8.A.7.1.2
pfam k141_271 k141_271_34 40631 41617 + Acyl_CoA_thio | 4HBT_3 | 4HBT_3C
TC k141_271 k141_271_35 41902 43584 + 3.A.1.120.6
Gene ID: k141_271_27
Type: TC
Location: 32414 - 33817 (-)
Gene ID: k141_271_28
Type: TF
Location: 34049 - 34822 (+)
Gene ID: k141_271_29
Type: TC
Location: 34982 - 35212 (+)
Gene ID: k141_271_30
Type: TC
Location: 35209 - 35664 (+)
Gene ID: k141_271_31
Type: CAZyme
Location: 35798 - 37966 (-)
Gene ID: k141_271_32
Type: TC
Location: 38334 - 38564 (-)
Gene ID: k141_271_33
Type: TC
Location: 38937 - 40634 (+)
Gene ID: k141_271_34
Type: pfam
Location: 40631 - 41617 (+)
Gene ID: k141_271_35
Type: TC
Location: 41902 - 43584 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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