Cluster: CGMR003283_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR003283
- CGC Family ID: CGCFAM_03032
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10012 | k141_10012_11 | 9631 | 11064 | + | 2.A.66.2.16 |
| CAZyme | k141_10012 | k141_10012_12 | 11109 | 11843 | + | GT26 |
| CAZyme | k141_10012 | k141_10012_13 | 11843 | 12943 | + | GT4 |
| CAZyme | k141_10012 | k141_10012_14 | 12940 | 13641 | + | GT32 |
| pfam | k141_10012 | k141_10012_15 | 13746 | 14576 | + | NAD_synthase |
| TC | k141_10012 | k141_10012_16 | 14782 | 17448 | + | 3.A.3.2.28 |
| NULL(UNKNOWN) | k141_10012 | k141_10012_17 | 18132 | 18395 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_10012 | k141_10012_18 | 18700 | 19095 | + | 3.A.1.124.2 |
Gene ID: k141_10012_11
Type: TC
Location: 9631 - 11064 (+)
Type: TC
Location: 9631 - 11064 (+)
Gene ID: k141_10012_12
Type: CAZyme
Location: 11109 - 11843 (+)
Type: CAZyme
Location: 11109 - 11843 (+)
Gene ID: k141_10012_13
Type: CAZyme
Location: 11843 - 12943 (+)
Type: CAZyme
Location: 11843 - 12943 (+)
Gene ID: k141_10012_14
Type: CAZyme
Location: 12940 - 13641 (+)
Type: CAZyme
Location: 12940 - 13641 (+)
Gene ID: k141_10012_15
Type: pfam
Location: 13746 - 14576 (+)
Type: pfam
Location: 13746 - 14576 (+)
Gene ID: k141_10012_16
Type: TC
Location: 14782 - 17448 (+)
Type: TC
Location: 14782 - 17448 (+)
Gene ID: k141_10012_17
Type:
Location: 18132 - 18395 (+)
Type:
Location: 18132 - 18395 (+)
Gene ID: k141_10012_18
Type: TC
Location: 18700 - 19095 (+)
Type: TC
Location: 18700 - 19095 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Lactobacillus
Species
Lactobacillus delbrueckii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.