dbCAN Logo

Cluster: CGMR003008_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_60766 k141_60766_28 28574 28918 + 9.B.143.3.6
TC k141_60766 k141_60766_29 28936 30738 + 8.A.59.2.1
TF k141_60766 k141_60766_30 30740 31525 + HTH_AraC
STP k141_60766 k141_60766_31 31629 32972 + SBP_bac_1
TC k141_60766 k141_60766_32 33114 33980 + 3.A.1.1.34
TC k141_60766 k141_60766_33 33985 34827 + 3.A.1.1.41
CAZyme k141_60766 k141_60766_34 34840 35793 + GH137
CAZyme k141_60766 k141_60766_35 35786 37309 + GH142
pfam k141_60766 k141_60766_36 37508 38695 + MFS_1
TC k141_60766 k141_60766_37 38868 39560 + 3.A.1.132.8
Gene ID: k141_60766_28
Type: TC
Location: 28574 - 28918 (+)
Gene ID: k141_60766_29
Type: TC
Location: 28936 - 30738 (+)
Gene ID: k141_60766_30
Type: TF
Location: 30740 - 31525 (+)
Gene ID: k141_60766_31
Type: STP
Location: 31629 - 32972 (+)
Gene ID: k141_60766_32
Type: TC
Location: 33114 - 33980 (+)
Gene ID: k141_60766_33
Type: TC
Location: 33985 - 34827 (+)
Gene ID: k141_60766_34
Type: CAZyme
Location: 34840 - 35793 (+)
Gene ID: k141_60766_35
Type: CAZyme
Location: 35786 - 37309 (+)
Gene ID: k141_60766_36
Type: pfam
Location: 37508 - 38695 (+)
Gene ID: k141_60766_37
Type: TC
Location: 38868 - 39560 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List