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Cluster: CGMR003008_CGC61

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27140 k141_27140_1 190 2226 - 1.B.52.2.2
TF k141_27140 k141_27140_2 2483 3247 - MerR
CAZyme k141_27140 k141_27140_3 3432 5144 - GH13_31
CAZyme k141_27140 k141_27140_4 5176 6858 - GH13_31
TC k141_27140 k141_27140_5 6898 8250 - 2.A.66.1.28
TF k141_27140 k141_27140_6 8348 9367 - LacI
TF k141_27140 k141_27140_7 9372 10895 - HTH_AraC | HTH_AraC
TC k141_27140 k141_27140_8 10899 12668 - 8.A.59.2.1
TC k141_27140 k141_27140_9 12912 14219 + 3.A.1.1.20
TC k141_27140 k141_27140_10 14419 15285 + 3.A.1.1.47
TC k141_27140 k141_27140_11 15301 16125 + 3.A.1.1.41
NULL(UNKNOWN) k141_27140 k141_27140_12 16183 16377 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_27140 k141_27140_13 16374 19355 + GH38
pfam k141_27140 k141_27140_14 19401 20543 + URO-D
pfam k141_27140 k141_27140_15 20613 21908 + Amidohydro_2
CAZyme k141_27140 k141_27140_16 21972 24656 + CBM67 | GH78
TC k141_27140 k141_27140_17 24674 25828 + 2.A.1.7.6
Gene ID: k141_27140_1
Type: TC
Location: 190 - 2226 (-)
Gene ID: k141_27140_2
Type: TF
Location: 2483 - 3247 (-)
Gene ID: k141_27140_3
Type: CAZyme
Location: 3432 - 5144 (-)
Gene ID: k141_27140_4
Type: CAZyme
Location: 5176 - 6858 (-)
Gene ID: k141_27140_5
Type: TC
Location: 6898 - 8250 (-)
Gene ID: k141_27140_6
Type: TF
Location: 8348 - 9367 (-)
Gene ID: k141_27140_7
Type: TF
Location: 9372 - 10895 (-)
Gene ID: k141_27140_8
Type: TC
Location: 10899 - 12668 (-)
Gene ID: k141_27140_9
Type: TC
Location: 12912 - 14219 (+)
Gene ID: k141_27140_10
Type: TC
Location: 14419 - 15285 (+)
Gene ID: k141_27140_11
Type: TC
Location: 15301 - 16125 (+)
Gene ID: k141_27140_12
Type:
Location: 16183 - 16377 (+)
Gene ID: k141_27140_13
Type: CAZyme
Location: 16374 - 19355 (+)
Gene ID: k141_27140_14
Type: pfam
Location: 19401 - 20543 (+)
Gene ID: k141_27140_15
Type: pfam
Location: 20613 - 21908 (+)
Gene ID: k141_27140_16
Type: CAZyme
Location: 21972 - 24656 (+)
Gene ID: k141_27140_17
Type: TC
Location: 24674 - 25828 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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