dbCAN Logo

Cluster: CGMR003008_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53080 k141_53080_25 28505 30292 - 8.A.59.2.1
STP k141_53080 k141_53080_26 30478 31752 + SBP_bac_1
TC k141_53080 k141_53080_27 31974 32843 + 3.A.1.1.37
TC k141_53080 k141_53080_28 32853 33683 + 3.A.1.1.47
CAZyme k141_53080 k141_53080_29 33690 34724 + GH137
CAZyme k141_53080 k141_53080_30 34904 36727 - GH146
STP k141_53080 k141_53080_31 37016 38374 + SBP_bac_1
TC k141_53080 k141_53080_32 38399 39280 + 3.A.1.1.42
TC k141_53080 k141_53080_33 39317 40168 + 3.A.1.1.41
TC k141_53080 k141_53080_34 40171 41964 + 8.A.59.2.1
CAZyme k141_53080 k141_53080_35 41984 42970 + GH130
CAZyme k141_53080 k141_53080_36 42999 43931 + GH137
Gene ID: k141_53080_25
Type: TC
Location: 28505 - 30292 (-)
Gene ID: k141_53080_26
Type: STP
Location: 30478 - 31752 (+)
Gene ID: k141_53080_27
Type: TC
Location: 31974 - 32843 (+)
Gene ID: k141_53080_28
Type: TC
Location: 32853 - 33683 (+)
Gene ID: k141_53080_29
Type: CAZyme
Location: 33690 - 34724 (+)
Gene ID: k141_53080_30
Type: CAZyme
Location: 34904 - 36727 (-)
Gene ID: k141_53080_31
Type: STP
Location: 37016 - 38374 (+)
Gene ID: k141_53080_32
Type: TC
Location: 38399 - 39280 (+)
Gene ID: k141_53080_33
Type: TC
Location: 39317 - 40168 (+)
Gene ID: k141_53080_34
Type: TC
Location: 40171 - 41964 (+)
Gene ID: k141_53080_35
Type: CAZyme
Location: 41984 - 42970 (+)
Gene ID: k141_53080_36
Type: CAZyme
Location: 42999 - 43931 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List