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Cluster: CGMR003008_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_53080 k141_53080_9 9752 10843 + 3.A.1.2.9
TC k141_53080 k141_53080_10 10914 12398 + 3.A.1.2.20
TC k141_53080 k141_53080_11 12411 13433 + 3.A.1.2.11
TC k141_53080 k141_53080_12 13433 14425 + 3.A.1.2.16
pfam k141_53080 k141_53080_13 14441 14788 + rhaM
pfam k141_53080 k141_53080_14 14807 15391 + LacAB_rpiB
TC k141_53080 k141_53080_15 15667 16986 + 3.A.1.1.28
TC k141_53080 k141_53080_16 17011 17880 + 3.A.1.1.7
TC k141_53080 k141_53080_17 17902 18741 + 3.A.1.1.28
CAZyme k141_53080 k141_53080_18 18806 20119 + GH4
NULL(UNKNOWN) k141_53080 k141_53080_19 20139 21263 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_53080 k141_53080_20 21340 23109 + 9.B.33.1.1
Gene ID: k141_53080_9
Type: TC
Location: 9752 - 10843 (+)
Gene ID: k141_53080_10
Type: TC
Location: 10914 - 12398 (+)
Gene ID: k141_53080_11
Type: TC
Location: 12411 - 13433 (+)
Gene ID: k141_53080_12
Type: TC
Location: 13433 - 14425 (+)
Gene ID: k141_53080_13
Type: pfam
Location: 14441 - 14788 (+)
Gene ID: k141_53080_14
Type: pfam
Location: 14807 - 15391 (+)
Gene ID: k141_53080_15
Type: TC
Location: 15667 - 16986 (+)
Gene ID: k141_53080_16
Type: TC
Location: 17011 - 17880 (+)
Gene ID: k141_53080_17
Type: TC
Location: 17902 - 18741 (+)
Gene ID: k141_53080_18
Type: CAZyme
Location: 18806 - 20119 (+)
Gene ID: k141_53080_19
Type:
Location: 20139 - 21263 (+)
Gene ID: k141_53080_20
Type: TC
Location: 21340 - 23109 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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