Cluster: CGMR003008_CGC48
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR003008
- CGC Family ID: CGCFAM_08124
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_38659 | k141_38659_1 | 1 | 3546 | - | GH50 |
| TF | k141_38659 | k141_38659_2 | 3855 | 4673 | - | HTH_AraC | HTH_AraC |
| pfam | k141_38659 | k141_38659_3 | 4779 | 5837 | + | URO-D |
| CAZyme | k141_38659 | k141_38659_4 | 5881 | 7380 | + | GH29 |
| pfam | k141_38659 | k141_38659_5 | 7477 | 8544 | - | URO-D |
| TF | k141_38659 | k141_38659_6 | 8547 | 10010 | - | HTH_AraC |
| TC | k141_38659 | k141_38659_7 | 10113 | 11867 | - | 9.B.33.1.1 |
| sulfatase | k141_38659 | k141_38659_8 | 11955 | 13349 | - | S1_28 |
| sulfatase | k141_38659 | k141_38659_9 | 13327 | 14823 | - | S1_11 |
| TC | k141_38659 | k141_38659_10 | 14828 | 15649 | - | 3.A.1.1.34 |
| TC | k141_38659 | k141_38659_11 | 15649 | 16530 | - | 3.A.1.1.36 |
| STP | k141_38659 | k141_38659_12 | 16586 | 17920 | - | SBP_bac_1 |
| sulfatase | k141_38659 | k141_38659_13 | 18019 | 19752 | - | S1_17 |
| CAZyme | k141_38659 | k141_38659_14 | 20058 | 20810 | - | GH31_4 |
| CAZyme | k141_38659 | k141_38659_15 | 20949 | 22106 | - | GH31_4 |
Gene ID: k141_38659_1
Type: CAZyme
Location: 1 - 3546 (-)
Type: CAZyme
Location: 1 - 3546 (-)
Gene ID: k141_38659_2
Type: TF
Location: 3855 - 4673 (-)
Type: TF
Location: 3855 - 4673 (-)
Gene ID: k141_38659_3
Type: pfam
Location: 4779 - 5837 (+)
Type: pfam
Location: 4779 - 5837 (+)
Gene ID: k141_38659_4
Type: CAZyme
Location: 5881 - 7380 (+)
Type: CAZyme
Location: 5881 - 7380 (+)
Gene ID: k141_38659_5
Type: pfam
Location: 7477 - 8544 (-)
Type: pfam
Location: 7477 - 8544 (-)
Gene ID: k141_38659_6
Type: TF
Location: 8547 - 10010 (-)
Type: TF
Location: 8547 - 10010 (-)
Gene ID: k141_38659_7
Type: TC
Location: 10113 - 11867 (-)
Type: TC
Location: 10113 - 11867 (-)
Gene ID: k141_38659_8
Type: sulfatase
Location: 11955 - 13349 (-)
Type: sulfatase
Location: 11955 - 13349 (-)
Gene ID: k141_38659_9
Type: sulfatase
Location: 13327 - 14823 (-)
Type: sulfatase
Location: 13327 - 14823 (-)
Gene ID: k141_38659_10
Type: TC
Location: 14828 - 15649 (-)
Type: TC
Location: 14828 - 15649 (-)
Gene ID: k141_38659_11
Type: TC
Location: 15649 - 16530 (-)
Type: TC
Location: 15649 - 16530 (-)
Gene ID: k141_38659_12
Type: STP
Location: 16586 - 17920 (-)
Type: STP
Location: 16586 - 17920 (-)
Gene ID: k141_38659_13
Type: sulfatase
Location: 18019 - 19752 (-)
Type: sulfatase
Location: 18019 - 19752 (-)
Gene ID: k141_38659_14
Type: CAZyme
Location: 20058 - 20810 (-)
Type: CAZyme
Location: 20058 - 20810 (-)
Gene ID: k141_38659_15
Type: CAZyme
Location: 20949 - 22106 (-)
Type: CAZyme
Location: 20949 - 22106 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Muricomes
Species
Muricomes sp000509105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.