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Cluster: CGMR003008_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_159634 k141_159634_32 32051 32722 - 3.A.1.1.24
pfam k141_159634 k141_159634_33 32860 33384 - Gate
pfam k141_159634 k141_159634_34 33600 35351 + DUF885
TC k141_159634 k141_159634_35 35391 36467 - 9.B.34.1.2
TC k141_159634 k141_159634_36 36569 37186 + 9.B.156.3.1
CAZyme k141_159634 k141_159634_37 37502 39544 + GH36
TC k141_159634 k141_159634_38 39584 40519 + 3.A.1.1.10
TC k141_159634 k141_159634_39 40533 41417 + 3.A.1.1.29
NULL(UNKNOWN) k141_159634 k141_159634_40 41601 43316 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_159634 k141_159634_41 43351 45684 + GH95
TC k141_159634 k141_159634_42 45708 47549 + 8.A.59.2.1
Gene ID: k141_159634_32
Type: TC
Location: 32051 - 32722 (-)
Gene ID: k141_159634_33
Type: pfam
Location: 32860 - 33384 (-)
Gene ID: k141_159634_34
Type: pfam
Location: 33600 - 35351 (+)
Gene ID: k141_159634_35
Type: TC
Location: 35391 - 36467 (-)
Gene ID: k141_159634_36
Type: TC
Location: 36569 - 37186 (+)
Gene ID: k141_159634_37
Type: CAZyme
Location: 37502 - 39544 (+)
Gene ID: k141_159634_38
Type: TC
Location: 39584 - 40519 (+)
Gene ID: k141_159634_39
Type: TC
Location: 40533 - 41417 (+)
Gene ID: k141_159634_40
Type:
Location: 41601 - 43316 (+)
Gene ID: k141_159634_41
Type: CAZyme
Location: 43351 - 45684 (+)
Gene ID: k141_159634_42
Type: TC
Location: 45708 - 47549 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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