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Cluster: CGMR003008_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_82638 k141_82638_1 451 2439 - GH31_4
TF k141_82638 k141_82638_2 2535 3335 - HTH_AraC | HTH_AraC
TC k141_82638 k141_82638_3 3352 5133 - 9.B.33.1.1
NULL(UNKNOWN) k141_82638 k141_82638_4 5088 6368 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_82638 k141_82638_5 6378 7205 - 3.A.1.1.49
TC k141_82638 k141_82638_6 7205 8113 - 3.A.1.1.7
TC k141_82638 k141_82638_7 8110 9387 - 3.A.1.1.22
TC k141_82638 k141_82638_8 9723 11903 - 9.B.74.1.1
TC k141_82638 k141_82638_9 11903 14434 - 9.B.74.1.1
Gene ID: k141_82638_1
Type: CAZyme
Location: 451 - 2439 (-)
Gene ID: k141_82638_2
Type: TF
Location: 2535 - 3335 (-)
Gene ID: k141_82638_3
Type: TC
Location: 3352 - 5133 (-)
Gene ID: k141_82638_4
Type:
Location: 5088 - 6368 (-)
Gene ID: k141_82638_5
Type: TC
Location: 6378 - 7205 (-)
Gene ID: k141_82638_6
Type: TC
Location: 7205 - 8113 (-)
Gene ID: k141_82638_7
Type: TC
Location: 8110 - 9387 (-)
Gene ID: k141_82638_8
Type: TC
Location: 9723 - 11903 (-)
Gene ID: k141_82638_9
Type: TC
Location: 11903 - 14434 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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