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Cluster: CGMR003008_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_4894 k141_4894_9 9990 10937 - GT2
pfam k141_4894 k141_4894_10 10950 12149 - LytR_cpsA_psr
TC k141_4894 k141_4894_11 12178 13581 - 9.B.18.1.1
pfam k141_4894 k141_4894_12 13968 15506 - Glucos_trans_II
pfam k141_4894 k141_4894_13 15574 16758 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_4894 k141_4894_14 16809 17795 - GT2
NULL(UNKNOWN) k141_4894 k141_4894_15 17829 18428 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_4894 k141_4894_16 18441 19175 - 3.A.1.103.1
TC k141_4894 k141_4894_17 19189 19965 - 3.A.1.103.6
Gene ID: k141_4894_9
Type: CAZyme
Location: 9990 - 10937 (-)
Gene ID: k141_4894_10
Type: pfam
Location: 10950 - 12149 (-)
Gene ID: k141_4894_11
Type: TC
Location: 12178 - 13581 (-)
Gene ID: k141_4894_12
Type: pfam
Location: 13968 - 15506 (-)
Gene ID: k141_4894_13
Type: pfam
Location: 15574 - 16758 (-)
Gene ID: k141_4894_14
Type: CAZyme
Location: 16809 - 17795 (-)
Gene ID: k141_4894_15
Type:
Location: 17829 - 18428 (-)
Gene ID: k141_4894_16
Type: TC
Location: 18441 - 19175 (-)
Gene ID: k141_4894_17
Type: TC
Location: 19189 - 19965 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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