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Cluster: CGMR003008_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_160533 k141_160533_37 41403 43169 - 1.A.33.1.4
pfam k141_160533 k141_160533_38 43547 43879 + MazG | MazG-like
CAZyme k141_160533 k141_160533_39 44233 46284 + GH42
TF k141_160533 k141_160533_40 46391 47473 - HTH_AraC
CAZyme k141_160533 k141_160533_41 47894 50338 + GH2
TC k141_160533 k141_160533_42 50464 51819 + 2.A.2.3.2
TF k141_160533 k141_160533_43 51880 52710 + HTH_AraC | HTH_AraC
CAZyme k141_160533 k141_160533_44 52916 55267 + GH3
Gene ID: k141_160533_37
Type: TC
Location: 41403 - 43169 (-)
Gene ID: k141_160533_38
Type: pfam
Location: 43547 - 43879 (+)
Gene ID: k141_160533_39
Type: CAZyme
Location: 44233 - 46284 (+)
Gene ID: k141_160533_40
Type: TF
Location: 46391 - 47473 (-)
Gene ID: k141_160533_41
Type: CAZyme
Location: 47894 - 50338 (+)
Gene ID: k141_160533_42
Type: TC
Location: 50464 - 51819 (+)
Gene ID: k141_160533_43
Type: TF
Location: 51880 - 52710 (+)
Gene ID: k141_160533_44
Type: CAZyme
Location: 52916 - 55267 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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