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Cluster: CGMR003008_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_30045 k141_30045_20 21338 22657 - GH28
CAZyme k141_30045 k141_30045_21 22657 24009 - GH28
TC k141_30045 k141_30045_22 24006 24809 - 3.A.1.1.18
TC k141_30045 k141_30045_23 24811 25833 - 3.A.1.1.21
STP k141_30045 k141_30045_24 25954 27291 - SBP_bac_1
CAZyme k141_30045 k141_30045_25 27304 28830 - GH29
TF k141_30045 k141_30045_26 29313 30371 + LacI
TF k141_30045 k141_30045_27 30763 30966 + CSD
CAZyme k141_30045 k141_30045_28 31224 32078 - GH73
CAZyme k141_30045 k141_30045_29 32328 33731 - GH32
TC k141_30045 k141_30045_30 33751 35622 - 4.A.1.2.1
Gene ID: k141_30045_20
Type: CAZyme
Location: 21338 - 22657 (-)
Gene ID: k141_30045_21
Type: CAZyme
Location: 22657 - 24009 (-)
Gene ID: k141_30045_22
Type: TC
Location: 24006 - 24809 (-)
Gene ID: k141_30045_23
Type: TC
Location: 24811 - 25833 (-)
Gene ID: k141_30045_24
Type: STP
Location: 25954 - 27291 (-)
Gene ID: k141_30045_25
Type: CAZyme
Location: 27304 - 28830 (-)
Gene ID: k141_30045_26
Type: TF
Location: 29313 - 30371 (+)
Gene ID: k141_30045_27
Type: TF
Location: 30763 - 30966 (+)
Gene ID: k141_30045_28
Type: CAZyme
Location: 31224 - 32078 (-)
Gene ID: k141_30045_29
Type: CAZyme
Location: 32328 - 33731 (-)
Gene ID: k141_30045_30
Type: TC
Location: 33751 - 35622 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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