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Cluster: CGMR003008_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_80527 k141_80527_38 52018 53418 + 4.A.1.2.5
CAZyme k141_80527 k141_80527_39 53422 54849 + GH43_35
CAZyme k141_80527 k141_80527_40 54851 56413 + GH35
CAZyme k141_80527 k141_80527_41 56410 57837 + GH1
TC k141_80527 k141_80527_42 57842 58363 + 4.A.1.2.6
TF k141_80527 k141_80527_43 58597 59310 + GntR
TC k141_80527 k141_80527_44 59461 60894 + 4.A.1.2.13
CAZyme k141_80527 k141_80527_45 60990 62633 + GH13_29
Gene ID: k141_80527_38
Type: TC
Location: 52018 - 53418 (+)
Gene ID: k141_80527_39
Type: CAZyme
Location: 53422 - 54849 (+)
Gene ID: k141_80527_40
Type: CAZyme
Location: 54851 - 56413 (+)
Gene ID: k141_80527_41
Type: CAZyme
Location: 56410 - 57837 (+)
Gene ID: k141_80527_42
Type: TC
Location: 57842 - 58363 (+)
Gene ID: k141_80527_43
Type: TF
Location: 58597 - 59310 (+)
Gene ID: k141_80527_44
Type: TC
Location: 59461 - 60894 (+)
Gene ID: k141_80527_45
Type: CAZyme
Location: 60990 - 62633 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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