dbCAN Logo

Cluster: CGMR003008_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_152812 k141_152812_16 18376 19347 + 3.A.1.2.11
TC k141_152812 k141_152812_17 19363 20916 + 3.A.1.2.20
pfam k141_152812 k141_152812_18 20913 21851 + BPD_transp_2
CAZyme k141_152812 k141_152812_19 21959 22927 - GH179
pfam k141_152812 k141_152812_20 23124 24119 + SPL
TF k141_152812 k141_152812_21 24319 25329 + LacI
TC k141_152812 k141_152812_22 25660 27165 + 3.A.1.2.20
TC k141_152812 k141_152812_23 27162 28142 + 3.A.1.2.9
TC k141_152812 k141_152812_24 28155 29117 + 3.A.1.2.8
TC k141_152812 k141_152812_25 29189 30286 + 3.A.1.2.9
Gene ID: k141_152812_16
Type: TC
Location: 18376 - 19347 (+)
Gene ID: k141_152812_17
Type: TC
Location: 19363 - 20916 (+)
Gene ID: k141_152812_18
Type: pfam
Location: 20913 - 21851 (+)
Gene ID: k141_152812_19
Type: CAZyme
Location: 21959 - 22927 (-)
Gene ID: k141_152812_20
Type: pfam
Location: 23124 - 24119 (+)
Gene ID: k141_152812_21
Type: TF
Location: 24319 - 25329 (+)
Gene ID: k141_152812_22
Type: TC
Location: 25660 - 27165 (+)
Gene ID: k141_152812_23
Type: TC
Location: 27162 - 28142 (+)
Gene ID: k141_152812_24
Type: TC
Location: 28155 - 29117 (+)
Gene ID: k141_152812_25
Type: TC
Location: 29189 - 30286 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List