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Cluster: CGMR002821_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_180264 k141_180264_8 5542 6366 - 3.A.1.24.5
TC k141_180264 k141_180264_9 6854 7900 + 3.A.1.20.1
TC k141_180264 k141_180264_10 7987 9096 + 3.A.1.20.1
TC k141_180264 k141_180264_11 9083 10747 + 3.A.1.20.1
TC k141_180264 k141_180264_12 10771 12489 + 8.A.59.2.1
TF k141_180264 k141_180264_13 12476 13249 + HTH_AraC
TC k141_180264 k141_180264_14 13483 14643 + 2.A.1.60.3
CAZyme k141_180264 k141_180264_15 14740 16140 - AA4
pfam k141_180264 k141_180264_16 16279 17049 + adh_short | adh_short_C2
pfam k141_180264 k141_180264_17 17473 18471 + URO-D
TC k141_180264 k141_180264_18 18512 19375 + 3.A.1.3.14
TC k141_180264 k141_180264_19 19395 20189 + 3.A.1.3.13
TC k141_180264 k141_180264_20 20206 20913 + 3.A.1.3.13
TC k141_180264 k141_180264_21 20931 21680 + 3.A.1.3.13
Gene ID: k141_180264_8
Type: TC
Location: 5542 - 6366 (-)
Gene ID: k141_180264_9
Type: TC
Location: 6854 - 7900 (+)
Gene ID: k141_180264_10
Type: TC
Location: 7987 - 9096 (+)
Gene ID: k141_180264_11
Type: TC
Location: 9083 - 10747 (+)
Gene ID: k141_180264_12
Type: TC
Location: 10771 - 12489 (+)
Gene ID: k141_180264_13
Type: TF
Location: 12476 - 13249 (+)
Gene ID: k141_180264_14
Type: TC
Location: 13483 - 14643 (+)
Gene ID: k141_180264_15
Type: CAZyme
Location: 14740 - 16140 (-)
Gene ID: k141_180264_16
Type: pfam
Location: 16279 - 17049 (+)
Gene ID: k141_180264_17
Type: pfam
Location: 17473 - 18471 (+)
Gene ID: k141_180264_18
Type: TC
Location: 18512 - 19375 (+)
Gene ID: k141_180264_19
Type: TC
Location: 19395 - 20189 (+)
Gene ID: k141_180264_20
Type: TC
Location: 20206 - 20913 (+)
Gene ID: k141_180264_21
Type: TC
Location: 20931 - 21680 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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