Cluster: CGMR002821_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR002821
- CGC Family ID: CGCFAM_00765
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_143703 | k141_143703_4 | 3362 | 4897 | + | 2.A.14.1.3 |
| CAZyme | k141_143703 | k141_143703_5 | 4980 | 6401 | + | AA4 |
| pfam | k141_143703 | k141_143703_6 | 6582 | 7865 | + | Lar_N | LarA_C |
| pfam | k141_143703 | k141_143703_7 | 7952 | 8263 | - | DUF6506 |
| TC | k141_143703 | k141_143703_8 | 8458 | 9918 | + | 2.A.21.8.2 |
Gene ID: k141_143703_4
Type: TC
Location: 3362 - 4897 (+)
Type: TC
Location: 3362 - 4897 (+)
Gene ID: k141_143703_5
Type: CAZyme
Location: 4980 - 6401 (+)
Type: CAZyme
Location: 4980 - 6401 (+)
Gene ID: k141_143703_6
Type: pfam
Location: 6582 - 7865 (+)
Type: pfam
Location: 6582 - 7865 (+)
Gene ID: k141_143703_7
Type: pfam
Location: 7952 - 8263 (-)
Type: pfam
Location: 7952 - 8263 (-)
Gene ID: k141_143703_8
Type: TC
Location: 8458 - 9918 (+)
Type: TC
Location: 8458 - 9918 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.