Cluster: CGMR002821_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR002821
- CGC Family ID: CGCFAM_00329
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_73429 | k141_73429_18 | 22781 | 24328 | + | 2.A.66.2.14 |
| pfam | k141_73429 | k141_73429_19 | 24354 | 25880 | + | TP_methylase | PRA-PH | PRA-PH | MazG | MazG |
| pfam | k141_73429 | k141_73429_20 | 25908 | 26186 | + | Bac_DNA_binding |
| CAZyme | k141_73429 | k141_73429_21 | 26298 | 27452 | + | GT28 |
| pfam | k141_73429 | k141_73429_22 | 27541 | 28854 | + | Polysacc_deac_2 |
| TC | k141_73429 | k141_73429_23 | 28868 | 29644 | + | 2.A.102.3.1 |
Gene ID: k141_73429_18
Type: TC
Location: 22781 - 24328 (+)
Type: TC
Location: 22781 - 24328 (+)
Gene ID: k141_73429_19
Type: pfam
Location: 24354 - 25880 (+)
Type: pfam
Location: 24354 - 25880 (+)
Gene ID: k141_73429_20
Type: pfam
Location: 25908 - 26186 (+)
Type: pfam
Location: 25908 - 26186 (+)
Gene ID: k141_73429_21
Type: CAZyme
Location: 26298 - 27452 (+)
Type: CAZyme
Location: 26298 - 27452 (+)
Gene ID: k141_73429_22
Type: pfam
Location: 27541 - 28854 (+)
Type: pfam
Location: 27541 - 28854 (+)
Gene ID: k141_73429_23
Type: TC
Location: 28868 - 29644 (+)
Type: TC
Location: 28868 - 29644 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.