Cluster: CGMR002821_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR002821
- CGC Family ID: CGCFAM_03694
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_96295 | k141_96295_12 | 12798 | 14207 | - | AA4 |
| pfam | k141_96295 | k141_96295_13 | 14449 | 15168 | - | DUF554 |
| TF | k141_96295 | k141_96295_14 | 15279 | 16850 | - | HTH_AraC | HTH_AraC |
| TC | k141_96295 | k141_96295_15 | 16873 | 18432 | - | 8.A.59.2.1 |
Gene ID: k141_96295_12
Type: CAZyme
Location: 12798 - 14207 (-)
Type: CAZyme
Location: 12798 - 14207 (-)
Gene ID: k141_96295_13
Type: pfam
Location: 14449 - 15168 (-)
Type: pfam
Location: 14449 - 15168 (-)
Gene ID: k141_96295_14
Type: TF
Location: 15279 - 16850 (-)
Type: TF
Location: 15279 - 16850 (-)
Gene ID: k141_96295_15
Type: TC
Location: 16873 - 18432 (-)
Type: TC
Location: 16873 - 18432 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Megasphaeraceae
Genus
Caecibacter
Species
Caecibacter massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.