Cluster: CGMR002797_CGC4
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR002797
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_8535 | k141_8535_89 | 92607 | 93758 | + | GH3 |
| pfam | k141_8535 | k141_8535_90 | 93905 | 94933 | - | Ribonuc_red_sm |
| pfam | k141_8535 | k141_8535_91 | 95030 | 97312 | - | Ribonuc_red_lgN | Ribonuc_red_lgC | ATP-cone |
| TC | k141_8535 | k141_8535_92 | 97753 | 99060 | + | 2.A.23.2.11 |
| pfam | k141_8535 | k141_8535_93 | 99354 | 103604 | + | BcrAD_BadFG | BcrAD_BadFG | DUF2229 |
| NULL(UNKNOWN) | k141_8535 | k141_8535_94 | 103863 | 104561 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_8535 | k141_8535_95 | 104720 | 105937 | - | 2.A.1.2.97 |
| NULL(UNKNOWN) | k141_8535 | k141_8535_96 | 106275 | 106817 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_8535 | k141_8535_97 | 106922 | 108562 | - | 2.A.14.1.2 |
| TC | k141_8535 | k141_8535_98 | 108713 | 110344 | - | 2.A.14.1.2 |
| pfam | k141_8535 | k141_8535_99 | 110466 | 111602 | - | Ldh_2 |
| TC | k141_8535 | k141_8535_100 | 112033 | 114030 | + | 3.D.1.9.2 |
| TC | k141_8535 | k141_8535_101 | 114055 | 115386 | + | 2.A.26.1.9 |
| pfam | k141_8535 | k141_8535_102 | 115586 | 115822 | + | DUF1653 |
| pfam | k141_8535 | k141_8535_103 | 115835 | 116611 | + | Hydrolase_3 |
| TC | k141_8535 | k141_8535_104 | 116655 | 117284 | + | 3.D.1.8.1 |
Gene ID: k141_8535_89
Type: CAZyme
Location: 92607 - 93758 (+)
Type: CAZyme
Location: 92607 - 93758 (+)
Gene ID: k141_8535_90
Type: pfam
Location: 93905 - 94933 (-)
Type: pfam
Location: 93905 - 94933 (-)
Gene ID: k141_8535_91
Type: pfam
Location: 95030 - 97312 (-)
Type: pfam
Location: 95030 - 97312 (-)
Gene ID: k141_8535_92
Type: TC
Location: 97753 - 99060 (+)
Type: TC
Location: 97753 - 99060 (+)
Gene ID: k141_8535_93
Type: pfam
Location: 99354 - 103604 (+)
Type: pfam
Location: 99354 - 103604 (+)
Gene ID: k141_8535_94
Type:
Location: 103863 - 104561 (+)
Type:
Location: 103863 - 104561 (+)
Gene ID: k141_8535_95
Type: TC
Location: 104720 - 105937 (-)
Type: TC
Location: 104720 - 105937 (-)
Gene ID: k141_8535_96
Type:
Location: 106275 - 106817 (+)
Type:
Location: 106275 - 106817 (+)
Gene ID: k141_8535_97
Type: TC
Location: 106922 - 108562 (-)
Type: TC
Location: 106922 - 108562 (-)
Gene ID: k141_8535_98
Type: TC
Location: 108713 - 110344 (-)
Type: TC
Location: 108713 - 110344 (-)
Gene ID: k141_8535_99
Type: pfam
Location: 110466 - 111602 (-)
Type: pfam
Location: 110466 - 111602 (-)
Gene ID: k141_8535_100
Type: TC
Location: 112033 - 114030 (+)
Type: TC
Location: 112033 - 114030 (+)
Gene ID: k141_8535_101
Type: TC
Location: 114055 - 115386 (+)
Type: TC
Location: 114055 - 115386 (+)
Gene ID: k141_8535_102
Type: pfam
Location: 115586 - 115822 (+)
Type: pfam
Location: 115586 - 115822 (+)
Gene ID: k141_8535_103
Type: pfam
Location: 115835 - 116611 (+)
Type: pfam
Location: 115835 - 116611 (+)
Gene ID: k141_8535_104
Type: TC
Location: 116655 - 117284 (+)
Type: TC
Location: 116655 - 117284 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Veillonellales
Family
Veillonellaceae
Genus
Veillonella
Species
Veillonella sp900549805
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.