Cluster: CGMR002591_CGC34
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR002591
- CGC Family ID: CGCFAM_01959
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_37933 | k141_37933_1 | 1 | 1284 | - | GH1 |
| CAZyme | k141_37933 | k141_37933_2 | 1284 | 2687 | - | GH4 |
| TF | k141_37933 | k141_37933_3 | 2917 | 3819 | + | HTH_6 |
| TC | k141_37933 | k141_37933_4 | 3860 | 5740 | - | 4.A.1.2.6 |
| pfam | k141_37933 | k141_37933_5 | 5838 | 6689 | - | PRD | PRD | CAT_RBD |
| TC | k141_37933 | k141_37933_6 | 7147 | 8931 | - | 3.A.1.106.8 |
| TC | k141_37933 | k141_37933_7 | 8931 | 10682 | - | 3.A.1.106.8 |
| pfam | k141_37933 | k141_37933_8 | 10824 | 11048 | - | UPF0154 |
| TC | k141_37933 | k141_37933_9 | 11299 | 12885 | + | 2.A.55.2.6 |
| NULL(UNKNOWN) | k141_37933 | k141_37933_10 | 12951 | 14726 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_37933 | k141_37933_11 | 14937 | 15839 | - | AP_endonuc_2 |
| CAZyme | k141_37933 | k141_37933_12 | 16118 | 18463 | + | GT51 |
Gene ID: k141_37933_1
Type: CAZyme
Location: 1 - 1284 (-)
Type: CAZyme
Location: 1 - 1284 (-)
Gene ID: k141_37933_2
Type: CAZyme
Location: 1284 - 2687 (-)
Type: CAZyme
Location: 1284 - 2687 (-)
Gene ID: k141_37933_3
Type: TF
Location: 2917 - 3819 (+)
Type: TF
Location: 2917 - 3819 (+)
Gene ID: k141_37933_4
Type: TC
Location: 3860 - 5740 (-)
Type: TC
Location: 3860 - 5740 (-)
Gene ID: k141_37933_5
Type: pfam
Location: 5838 - 6689 (-)
Type: pfam
Location: 5838 - 6689 (-)
Gene ID: k141_37933_6
Type: TC
Location: 7147 - 8931 (-)
Type: TC
Location: 7147 - 8931 (-)
Gene ID: k141_37933_7
Type: TC
Location: 8931 - 10682 (-)
Type: TC
Location: 8931 - 10682 (-)
Gene ID: k141_37933_8
Type: pfam
Location: 10824 - 11048 (-)
Type: pfam
Location: 10824 - 11048 (-)
Gene ID: k141_37933_9
Type: TC
Location: 11299 - 12885 (+)
Type: TC
Location: 11299 - 12885 (+)
Gene ID: k141_37933_10
Type:
Location: 12951 - 14726 (-)
Type:
Location: 12951 - 14726 (-)
Gene ID: k141_37933_11
Type: pfam
Location: 14937 - 15839 (-)
Type: pfam
Location: 14937 - 15839 (-)
Gene ID: k141_37933_12
Type: CAZyme
Location: 16118 - 18463 (+)
Type: CAZyme
Location: 16118 - 18463 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Enterococcaceae
Genus
Enterococcus_B
Species
Enterococcus_B lactis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.