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Cluster: CGMR002591_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28767 k141_28767_17 23983 24855 - 3.A.1.1.29
TC k141_28767 k141_28767_18 25153 26127 + 3.A.1.1.10
pfam k141_28767 k141_28767_19 26149 26841 + DUF624
STP k141_28767 k141_28767_20 26807 28315 + SBP_bac_1
CAZyme k141_28767 k141_28767_21 28389 29492 + GH105
CAZyme k141_28767 k141_28767_22 29495 30832 + GH28
peptidase k141_28767 k141_28767_23 30789 31697 + S09.UPW
CAZyme k141_28767 k141_28767_24 31694 32617 + CE8
NULL(UNKNOWN) k141_28767 k141_28767_25 32614 33024 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_28767 k141_28767_26 33028 34596 + CBM91 | GH43_11
TC k141_28767 k141_28767_27 34837 36255 + 2.A.2.3.1
CAZyme k141_28767 k141_28767_28 36267 37577 + GH28
Gene ID: k141_28767_17
Type: TC
Location: 23983 - 24855 (-)
Gene ID: k141_28767_18
Type: TC
Location: 25153 - 26127 (+)
Gene ID: k141_28767_19
Type: pfam
Location: 26149 - 26841 (+)
Gene ID: k141_28767_20
Type: STP
Location: 26807 - 28315 (+)
Gene ID: k141_28767_21
Type: CAZyme
Location: 28389 - 29492 (+)
Gene ID: k141_28767_22
Type: CAZyme
Location: 29495 - 30832 (+)
Gene ID: k141_28767_23
Type: peptidase
Location: 30789 - 31697 (+)
Gene ID: k141_28767_24
Type: CAZyme
Location: 31694 - 32617 (+)
Gene ID: k141_28767_25
Type:
Location: 32614 - 33024 (+)
Gene ID: k141_28767_26
Type: CAZyme
Location: 33028 - 34596 (+)
Gene ID: k141_28767_27
Type: TC
Location: 34837 - 36255 (+)
Gene ID: k141_28767_28
Type: CAZyme
Location: 36267 - 37577 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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