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Cluster: CGMR002591_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_28767 k141_28767_1 165 2318 - GH92
TF k141_28767 k141_28767_2 2320 3366 - GntR
CAZyme k141_28767 k141_28767_3 3515 4804 + GH125
CAZyme k141_28767 k141_28767_4 4817 7504 + GH38
pfam k141_28767 k141_28767_5 7505 8362 + ROK
pfam k141_28767 k141_28767_6 8433 9290 - PseudoU_synth_2
CAZyme k141_28767 k141_28767_7 9501 11672 + GT51
pfam k141_28767 k141_28767_8 11740 12081 + Com_YlbF
TC k141_28767 k141_28767_9 12356 14110 - 3.A.1.117.3
pfam k141_28767 k141_28767_10 14121 14957 - AP_endonuc_2
CAZyme k141_28767 k141_28767_11 14959 15642 - CE12
Gene ID: k141_28767_1
Type: CAZyme
Location: 165 - 2318 (-)
Gene ID: k141_28767_2
Type: TF
Location: 2320 - 3366 (-)
Gene ID: k141_28767_3
Type: CAZyme
Location: 3515 - 4804 (+)
Gene ID: k141_28767_4
Type: CAZyme
Location: 4817 - 7504 (+)
Gene ID: k141_28767_5
Type: pfam
Location: 7505 - 8362 (+)
Gene ID: k141_28767_6
Type: pfam
Location: 8433 - 9290 (-)
Gene ID: k141_28767_7
Type: CAZyme
Location: 9501 - 11672 (+)
Gene ID: k141_28767_8
Type: pfam
Location: 11740 - 12081 (+)
Gene ID: k141_28767_9
Type: TC
Location: 12356 - 14110 (-)
Gene ID: k141_28767_10
Type: pfam
Location: 14121 - 14957 (-)
Gene ID: k141_28767_11
Type: CAZyme
Location: 14959 - 15642 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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