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Cluster: CGMR002591_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_34255 k141_34255_2 1021 1836 - GT2
CAZyme k141_34255 k141_34255_3 1892 2803 - GT2
CAZyme k141_34255 k141_34255_4 2833 3873 - GT4
CAZyme k141_34255 k141_34255_5 3870 4958 - GT4
pfam k141_34255 k141_34255_6 4979 5872 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
TC k141_34255 k141_34255_7 5869 6483 - 9.B.18.1.3
TC k141_34255 k141_34255_8 6494 8311 - 9.B.18.2.1
pfam k141_34255 k141_34255_9 8324 9088 - CpsB_CapC
TC k141_34255 k141_34255_10 9116 9814 - 8.A.3.1.2
TC k141_34255 k141_34255_11 9827 10606 - 8.A.3.2.4
Gene ID: k141_34255_2
Type: CAZyme
Location: 1021 - 1836 (-)
Gene ID: k141_34255_3
Type: CAZyme
Location: 1892 - 2803 (-)
Gene ID: k141_34255_4
Type: CAZyme
Location: 2833 - 3873 (-)
Gene ID: k141_34255_5
Type: CAZyme
Location: 3870 - 4958 (-)
Gene ID: k141_34255_6
Type: pfam
Location: 4979 - 5872 (-)
Gene ID: k141_34255_7
Type: TC
Location: 5869 - 6483 (-)
Gene ID: k141_34255_8
Type: TC
Location: 6494 - 8311 (-)
Gene ID: k141_34255_9
Type: pfam
Location: 8324 - 9088 (-)
Gene ID: k141_34255_10
Type: TC
Location: 9116 - 9814 (-)
Gene ID: k141_34255_11
Type: TC
Location: 9827 - 10606 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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