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Cluster: CGMR002501_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_43725 k141_43725_19 20488 21414 + GT2
CAZyme k141_43725 k141_43725_20 21419 22465 + GT2
pfam k141_43725 k141_43725_21 22600 24951 + DUF4842
NULL(UNKNOWN) k141_43725 k141_43725_22 24971 26110 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_43725 k141_43725_23 26107 27261 + GT4
CAZyme k141_43725 k141_43725_24 27278 28129 + GT2
pfam k141_43725 k141_43725_25 28135 29214 + Exo_endo_phos
STP k141_43725 k141_43725_26 29247 31175 + HATPase_c | HisKA | PAS | Response_reg
CAZyme k141_43725 k141_43725_27 31177 32358 + GT2
pfam k141_43725 k141_43725_28 32436 33368 - 3Beta_HSD | Epimerase | GDP_Man_Dehyd
TC k141_43725 k141_43725_29 33427 34743 - 3.A.1.121.4
Gene ID: k141_43725_19
Type: CAZyme
Location: 20488 - 21414 (+)
Gene ID: k141_43725_20
Type: CAZyme
Location: 21419 - 22465 (+)
Gene ID: k141_43725_21
Type: pfam
Location: 22600 - 24951 (+)
Gene ID: k141_43725_22
Type:
Location: 24971 - 26110 (+)
Gene ID: k141_43725_23
Type: CAZyme
Location: 26107 - 27261 (+)
Gene ID: k141_43725_24
Type: CAZyme
Location: 27278 - 28129 (+)
Gene ID: k141_43725_25
Type: pfam
Location: 28135 - 29214 (+)
Gene ID: k141_43725_26
Type: STP
Location: 29247 - 31175 (+)
Gene ID: k141_43725_27
Type: CAZyme
Location: 31177 - 32358 (+)
Gene ID: k141_43725_28
Type: pfam
Location: 32436 - 33368 (-)
Gene ID: k141_43725_29
Type: TC
Location: 33427 - 34743 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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