Cluster: CGMR002452_CGC67
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR002452
- CGC Family ID: CGCFAM_00363
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_130042 | k141_130042_4 | 3038 | 4333 | + | GH23 |
| STP | k141_130042 | k141_130042_5 | 4403 | 6652 | + | HD |
| TF | k141_130042 | k141_130042_6 | 6743 | 7108 | - | MerR |
| TC | k141_130042 | k141_130042_7 | 7120 | 8088 | - | 1.A.34.1.3 |
| pfam | k141_130042 | k141_130042_8 | 8192 | 10810 | + | tRNA-synt_2c | DHHA1 | tRNA_SAD |
| NULL(UNKNOWN) | k141_130042 | k141_130042_9 | 10823 | 10954 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_130042 | k141_130042_10 | 11036 | 13282 | + | GH92 |
| TF | k141_130042 | k141_130042_11 | 13298 | 13858 | + | GerE |
| STP | k141_130042 | k141_130042_12 | 13917 | 14915 | + | FecR |
| CAZyme | k141_130042 | k141_130042_13 | 14965 | 17241 | + | GH92 |
| TC | k141_130042 | k141_130042_14 | 18148 | 21498 | + | 1.B.14.6.13 |
| TC | k141_130042 | k141_130042_15 | 21517 | 23100 | + | 8.A.46.2.2 |
| pfam | k141_130042 | k141_130042_16 | 23121 | 24191 | + | GH18_BT1044-like |
| pfam | k141_130042 | k141_130042_17 | 24199 | 25341 | + | Pentaxin | BT_3987-like_N | Laminin_G_3 |
| CAZyme | k141_130042 | k141_130042_18 | 25380 | 26783 | + | GH18 |
Gene ID: k141_130042_4
Type: CAZyme
Location: 3038 - 4333 (+)
Type: CAZyme
Location: 3038 - 4333 (+)
Gene ID: k141_130042_5
Type: STP
Location: 4403 - 6652 (+)
Type: STP
Location: 4403 - 6652 (+)
Gene ID: k141_130042_6
Type: TF
Location: 6743 - 7108 (-)
Type: TF
Location: 6743 - 7108 (-)
Gene ID: k141_130042_7
Type: TC
Location: 7120 - 8088 (-)
Type: TC
Location: 7120 - 8088 (-)
Gene ID: k141_130042_8
Type: pfam
Location: 8192 - 10810 (+)
Type: pfam
Location: 8192 - 10810 (+)
Gene ID: k141_130042_9
Type:
Location: 10823 - 10954 (-)
Type:
Location: 10823 - 10954 (-)
Gene ID: k141_130042_10
Type: CAZyme
Location: 11036 - 13282 (+)
Type: CAZyme
Location: 11036 - 13282 (+)
Gene ID: k141_130042_11
Type: TF
Location: 13298 - 13858 (+)
Type: TF
Location: 13298 - 13858 (+)
Gene ID: k141_130042_12
Type: STP
Location: 13917 - 14915 (+)
Type: STP
Location: 13917 - 14915 (+)
Gene ID: k141_130042_13
Type: CAZyme
Location: 14965 - 17241 (+)
Type: CAZyme
Location: 14965 - 17241 (+)
Gene ID: k141_130042_14
Type: TC
Location: 18148 - 21498 (+)
Type: TC
Location: 18148 - 21498 (+)
Gene ID: k141_130042_15
Type: TC
Location: 21517 - 23100 (+)
Type: TC
Location: 21517 - 23100 (+)
Gene ID: k141_130042_16
Type: pfam
Location: 23121 - 24191 (+)
Type: pfam
Location: 23121 - 24191 (+)
Gene ID: k141_130042_17
Type: pfam
Location: 24199 - 25341 (+)
Type: pfam
Location: 24199 - 25341 (+)
Gene ID: k141_130042_18
Type: CAZyme
Location: 25380 - 26783 (+)
Type: CAZyme
Location: 25380 - 26783 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.